Is K m the same for all enzymes?
No, K m is unique for each enzyme-substrate pair.
What are the two main types of sites in an allosteric enzyme?
Catalytic and regulatory sites.
1/175
p.16
Michaelis-Menten Equation

Is K m the same for all enzymes?

No, K m is unique for each enzyme-substrate pair.

p.39
Allosteric Regulation

What are the two main types of sites in an allosteric enzyme?

Catalytic and regulatory sites.

p.20
Experimental Determination of Enzyme Parameters

How are Vmax and Km values determined?

By measuring initial velocities at various substrate concentrations with a fixed enzyme concentration.

p.30
Enzyme Inhibition

What do classical competitive inhibitors resemble?

Substrates.

p.34
Enzyme Inhibition

What are noncompetitive inhibitors?

Substances that bind to an enzyme at a site other than the active site, reducing its activity regardless of substrate concentration.

p.5
Enzyme Classification

What type of enzymes are hydrolases?

Enzymes that catalyze the hydrolysis of chemical bonds.

p.37
Factors Affecting Enzyme Activity

What are the two main methods of rapid enzyme activity regulation?

Allosteric regulation and Covalent modification.

p.41
Allosteric Regulation

What is a negative modulator of PFK-1?

Phosphoenolpyruvate (feedback inhibition).

p.6
Enzyme Classification

What is the function of isomerases?

Isomerases catalyze the rearrangement of molecular structures.

p.4
Enzyme Classification

What are transferases?

Enzymes that transfer functional groups from one molecule to another.

p.31
Enzyme Inhibition

How does a competitive inhibitor affect Km?

It raises Km without affecting Vmax.

p.41
Allosteric Regulation

What is a positive modulator of PFK-1?

ADP.

p.3
Enzyme Classification

How are enzymes typically named?

For the substrates and type of reaction with the suffix '-ase'.

p.8
Enzyme Kinetics

In enzyme-catalyzed reactions, what is the relationship between reaction velocity and enzyme concentration?

Velocity is usually proportional to enzyme concentration [E].

p.39
Allosteric Regulation

What happens to an allosteric enzyme upon binding of a modulator?

It undergoes a conformational change.

p.19
Catalytic Efficiency

What is the upper limit for k cat / K m?

10^8 to 10^9 M^-1 s^-1.

p.10
Michaelis-Menten Equation

What is the Michaelis constant represented by in the M-M equation?

Km.

p.44
Covalent Modification of Enzymes

How is pyruvate dehydrogenase inactivated?

By phosphorylation.

p.11
Michaelis-Menten Equation

What is the significance of the assumption regarding [P] when deriving the Michaelis-Menten equation?

At early reaction times, [P] is negligible, allowing k-2 to be ignored.

p.19
Catalytic Efficiency

What characterizes an enzyme with k cat / K m close to the diffusion-controlled limit?

It indicates high catalytic efficiency.

p.4
Enzyme Classification

What are oxidoreductases?

Enzymes that catalyze oxidation-reduction reactions.

p.30
Enzyme Inhibition

Can you provide an example of a classical competitive inhibitor?

An example is methotrexate, which resembles the substrate of the enzyme dihydrofolate reductase.

p.33
Enzyme Inhibition

What does an uncompetitive inhibitor bind to?

The ES complex.

p.34
Enzyme Inhibition

Can noncompetitive inhibitors be overcome by increasing substrate concentration?

No, because they bind to the enzyme regardless of substrate presence.

p.6
Enzyme Classification

What do ligases do?

Ligases catalyze the joining of two molecules with the use of ATP.

p.31
Enzyme Inhibition

What is a competitive inhibitor?

A substance that binds to a free enzyme and competes with the substrate for enzyme binding.

p.27
Enzyme Kinetics

What is the general reaction format for multisubstrate reactions?

A + B → P + Q.

p.27
Enzyme Kinetics

What type of reactions does the equation A + B → P + Q represent?

Multisubstrate reactions.

p.33
Enzyme Inhibition

What are the effects of an uncompetitive inhibitor on K m and V max?

It lowers both K m and V max.

p.17
Enzyme Kinetics

What is the relationship between V max and k cat at saturating substrate concentration?

V max = k 2 [E] T, where k 2 = k cat.

p.21
Michaelis-Menten Equation

What does the X-intercept of the Lineweaver-Burke Plot represent?

-1/Km.

p.40
Allosteric Regulation

How do positive modulators influence allosteric enzymes?

They increase the enzyme's activity.

p.13
Enzyme Kinetics

What happens to v0 when substrate concentration [S] is very high?

v0 equals Vmax and [ES] equals [ET].

p.8
Enzyme Kinetics

What type of kinetics is described by the reaction rate not increasing linearly with substrate concentration?

Hyperbolic Kinetics.

p.7
Enzyme Kinetics

What do initial velocities (v0) indicate in enzyme kinetics?

They indicate reaction rates.

p.31
Enzyme Inhibition

What can relieve the inhibition caused by a competitive inhibitor?

Higher substrate concentration [S].

p.31
Enzyme Inhibition

What is Km app?

The apparent Km, which is the Km with the inhibitor present.

p.35
Enzyme Inhibition

What do non-competitive inhibitors bind to?

They can bind to free enzyme (E) or the enzyme-substrate complex (ES).

p.40
Allosteric Regulation

What do modulators do to allosteric enzymes?

They affect the enzyme's activity by binding to sites other than the active site.

p.22
Factors Affecting Enzyme Activity

How does regular exercise affect metabolism?

Increases metabolic rate and improves energy utilization.

p.11
Michaelis-Menten Equation

What is the relationship between E, S, ES, and P in enzyme kinetics?

E + S ↔ ES ↔ E + P.

p.17
Enzyme Kinetics

What is the equation for the initial reaction velocity (v 0)?

v 0 = k 2 [ES].

p.44
Covalent Modification of Enzymes

Which specific residue in pyruvate dehydrogenase is mentioned as being phosphorylated?

A serine residue.

p.43
Covalent Modification of Enzymes

Is covalent modification reversible?

Yes, it is reversible.

p.35
Enzyme Inhibition

What is the relationship between 1/V max and 1/K m in the presence of a non-competitive inhibitor?

1/V max decreases, while 1/K m remains unchanged.

p.43
Covalent Modification of Enzymes

What is the most common type of covalent modification?

Phosphorylation/dephosphorylation.

p.36
Enzyme Inhibition

What part of the active site is involved in the inhibition by DFP?

Serine.

p.37
Factors Affecting Enzyme Activity

What is the response time for enzyme quantity regulation?

Minutes to hours.

p.37
Factors Affecting Enzyme Activity

What is the response time for enzyme activity regulation?

Fraction of seconds.

p.41
Enzyme Structure and Function

What is the role of phosphofructosekinase-1 (PFK-1) in glycolysis?

PFK-1 catalyzes an early step in glycolysis, which is an ATP-generating pathway.

p.21
Michaelis-Menten Equation

What does the Lineweaver-Burke Plot plot?

1/V₀ vs 1/[S].

p.41
Enzyme Inhibition

What type of regulation does phosphoenolpyruvate exert on PFK-1?

Feedback inhibition.

p.11
Michaelis-Menten Equation

What does the initial velocity (v0) equal in the context of enzyme kinetics?

v0 = k2 [ES].

p.42
Allosteric Regulation

What do allosteric modulators bind to in an enzyme?

A regulatory site other than the active site.

p.17
Enzyme Kinetics

What does V max represent in enzyme kinetics?

The maximum rate of reaction at saturating substrate concentration.

p.27
Enzyme Kinetics

What is a ping-pong mechanism in multisubstrate reactions?

One substrate binds and is converted to product, releasing it before the second substrate binds.

p.42
Enzyme Structure and Function

What is the structure of the mature PFK-1 enzyme?

Tetramer.

p.12
Enzyme Kinetics

What does the steady state assumption for enzyme-substrate complex concentration state?

The rate of ES formation equals the rate of ES breakdown.

p.36
Enzyme Inhibition

What is an example of an irreversible inhibitor?

DFP (nerve gas).

p.38
Allosteric Regulation

What is a characteristic of allosteric enzymes?

They usually have multiple subunits.

p.36
Enzyme Inhibition

Which enzymes are inhibited by DFP?

Hydrolases like chymotrypsin and acetylcholine esterase.

p.1
Enzyme Kinetics

How do enzymes affect reaction rates compared to uncatalyzed reactions?

Enzymes accelerate reaction rates tremendously over uncatalyzed rates.

p.20
Enzyme Kinetics

What is the formula to calculate kcat?

kcat = Vmax / [E] total.

p.20
Factors Affecting Enzyme Activity

What is a challenge in determining Vmax experimentally?

It is difficult to achieve the substrate concentration needed for Vmax determination.

p.34
Enzyme Inhibition

How do noncompetitive inhibitors affect enzyme activity?

They decrease the maximum rate of reaction (Vmax) without affecting the Km value.

p.29
Enzyme Inhibition

What are reversible inhibitors?

Inhibitors that bind to enzymes non-covalently and can be removed, restoring enzyme activity.

p.40
Allosteric Regulation

What type of curve is associated with the activity of allosteric enzymes?

Sigmoidal curve.

p.10
Michaelis-Menten Equation

What is the equation for the Michaelis constant (Km)?

Km = (k-1 + k2) / k1.

p.18
Enzyme Kinetics

What are the two measures for enzyme performance?

Km (binding affinity) and kcat (conversion rate).

p.35
Enzyme Inhibition

How does a non-competitive inhibitor affect K m?

K m remains the same.

p.10
Michaelis-Menten Equation

What type of curve does the Michaelis-Menten equation produce?

A rectangular hyperbola.

p.29
Enzyme Inhibition

What is a non-competitive inhibitor?

A reversible inhibitor that binds to an enzyme at a site other than the active site, reducing enzyme activity regardless of substrate concentration.

p.40
Allosteric Regulation

What is the significance of the sigmoidal curve in allosteric enzyme activity?

It indicates cooperative binding and a change in enzyme conformation.

p.42
Allosteric Regulation

What effect does binding of ADP to the regulatory site have on PFK-1?

Maintains PFK-1 in the active state and increases its affinity for F6P.

p.1
Enzyme Structure and Function

What binds to enzymes during a chemical reaction?

Reactants, also known as substrates, bind to enzymes.

p.38
Allosteric Regulation

What happens if regulatory sites in allosteric enzymes are removed?

It does not affect catalytic functions.

p.37
Factors Affecting Enzyme Activity

What processes are involved in regulating enzyme quantity?

Transcription, Translation, and Enzyme degradation.

p.20
Enzyme Kinetics

What is required to determine kcat values?

Vmax and the absolute concentration of the enzyme.

p.22
Factors Affecting Enzyme Activity

What are the physical benefits of exercise?

Improves cardiovascular health, strengthens muscles, and enhances flexibility.

p.10
Michaelis-Menten Equation

What does the Michaelis-Menten equation explain?

Hyperbolic kinetics.

p.13
Michaelis-Menten Equation

What does the equation [ES] = [E][S]/Km represent?

It shows the relationship between enzyme-substrate complex concentration and Michaelis constant.

p.21
Michaelis-Menten Equation

What does the Y-intercept of the Lineweaver-Burke Plot represent?

1/V max.

p.29
Enzyme Inhibition

What are the two main types of reversible inhibitors?

Competitive and non-competitive inhibitors.

p.1
Enzyme Structure and Function

What are enzymes?

Biological catalysts that increase the rates of chemical reactions.

p.21
Michaelis-Menten Equation

What is the equation format of the Lineweaver-Burke Plot?

y = mx + c.

p.35
Enzyme Inhibition

Do non-competitive inhibitors bind to the active site?

No, they do not bind to the active site.

p.9
Enzyme Kinetics

What is the simple case of an enzyme-catalyzed reaction with a single substrate?

E + S ↔ ES → E + P.

p.12
Enzyme Kinetics

What is the equation representing the rate of formation and breakdown of the enzyme-substrate complex [ES]?

k1[E][S] = k-1[ES] + k2[ES].

p.18
Factors Affecting Enzyme Activity

What factors affect catalytic efficiency?

Frequency of enzyme-substrate collisions and speed of chemical changes during catalysis.

p.12
Michaelis-Menten Equation

What is the Michaelis constant (Km) in the context of enzyme kinetics?

Km = k-1 + k2 / k1.

p.43
Covalent Modification of Enzymes

What enzymes are responsible for dephosphorylation?

Ser/Thr protein phosphatase and Tyrosine protein phosphatase.

p.16
Michaelis-Menten Equation

What does K m represent in enzyme kinetics?

The Michaelis constant, unique for each enzyme-substrate pair.

p.5
Enzyme Classification

What is the primary function of lyases?

To catalyze the addition or removal of groups to form double bonds.

p.7
Enzyme Kinetics

What is the focus of enzyme kinetics?

The study of the rates of enzyme-catalyzed reactions under different conditions.

p.7
Enzyme Kinetics

What happens to the reaction curves over time in enzyme kinetics?

The curves flatten over time.

p.7
Enzyme Kinetics

What does S → P represent in enzyme kinetics?

The conversion of substrate (S) to product (P).

p.27
Enzyme Kinetics

What are common kinetic mechanisms in 2-substrate enzymatic reactions?

Sequential and ping-pong mechanisms.

p.32
Enzyme Inhibition

What are uncompetitive inhibitors?

Inhibitors that bind only to the enzyme-substrate complex, preventing the reaction from proceeding.

p.9
Enzyme Kinetics

What is the rate equation for a first-order reaction?

v = k [A], where k is the rate constant.

p.18
Enzyme Kinetics

What does a decrease in Km indicate about enzyme performance?

It indicates better binding of the enzyme to its substrate.

p.15
Michaelis-Menten Equation

What is the relationship between K_m and the affinity of an enzyme for its substrate?

A small K_m indicates a higher affinity of the enzyme for the substrate.

p.17
Enzyme Kinetics

What does the term [E] T refer to?

Total enzyme concentration.

p.17
Catalytic Efficiency

What is the significance of k cat in enzyme reactions?

It reflects how quickly an enzyme can catalyze the reaction from ES to E + P.

p.9
Enzyme Kinetics

What does ES represent in the enzyme-catalyzed reaction?

ES represents the enzyme-substrate complex.

p.38
Allosteric Regulation

Are allosteric effectors altered chemically by the enzyme?

No, they are not altered chemically.

p.38
Allosteric Regulation

What role do end products often play in allosteric regulation?

They are often allosteric inhibitors, involved in feedback inhibition.

p.22
Factors Affecting Enzyme Activity

How does exercise impact mental health?

Reduces symptoms of anxiety and depression, and improves mood.

p.44
Covalent Modification of Enzymes

What role do protein kinases and phosphatases play in enzyme regulation?

They involve the phosphorylation and dephosphorylation of enzymes.

p.29
Enzyme Inhibition

How do reversible inhibitors affect enzyme activity?

They temporarily decrease enzyme activity by binding to the enzyme or the enzyme-substrate complex.

p.33
Enzyme Inhibition

What is the relationship expressed by 1/V max - 1/K m?

It relates to the effects of uncompetitive inhibition.

p.13
Enzyme Kinetics

What occurs when the enzyme is saturated with substrate?

Maximum reaction velocity (Vmax) occurs.

p.29
Enzyme Inhibition

What is a competitive inhibitor?

A reversible inhibitor that competes with the substrate for the active site of the enzyme.

p.9
Enzyme Kinetics

What is the rate equation for a second-order reaction?

v = k [A][B], where k is the rate constant.

p.36
Enzyme Inhibition

What is the effect of irreversible inhibitors on enzyme activities?

Permanent inactivation.

p.11
Michaelis-Menten Equation

What happens to the formation of ES from E + P early in the reaction?

There is no ES formation because [P] is negligible.

p.32
Enzyme Inhibition

Can uncompetitive inhibitors be overcome by increasing substrate concentration?

No, they cannot be overcome by increasing substrate concentration.

p.38
Allosteric Regulation

How do allosteric modulators/effectors bind to allosteric enzymes?

They bind non-covalently to a regulatory site other than the active site.

p.28
Enzyme Inhibition

How do reversible inhibitors function?

They bind through non-covalent interactions and can disassociate from the enzyme.

p.38
Allosteric Regulation

Do allosteric effectors assemble substrates or products of the enzyme?

No, they do not assemble substrates or products.

p.39
Allosteric Regulation

What is the effect of a negative modulator on an allosteric enzyme?

It has the opposite effect, inhibiting the enzyme's activity.

p.22
Factors Affecting Enzyme Activity

What is the recommended amount of exercise for adults?

At least 150 minutes of moderate aerobic activity per week.

p.34
Michaelis-Menten Equation

What is the effect of noncompetitive inhibitors on the Michaelis-Menten equation?

They lower Vmax but do not change Km.

p.35
Enzyme Inhibition

What effect do non-competitive inhibitors have on V max?

They lower V max.

p.10
Michaelis-Menten Equation

What does the M-M equation describe in terms of enzyme activity?

The relationship between substrate concentration and reaction rate.

p.14
Experimental Determination of Enzyme Parameters

How can K m be determined?

Experimentally.

p.1
Enzyme Structure and Function

What is the primary composition of most enzymes?

Most enzymes are proteins, except for a small group of catalytic RNA molecules.

p.13
Michaelis-Menten Equation

What is the relationship between Vmax and total enzyme concentration [ET]?

Vmax = k2[ET].

p.18
Catalytic Efficiency

What is the formula for catalytic efficiency?

kcat / Km.

p.43
Covalent Modification of Enzymes

How many enzymes are required for covalent modification?

One enzyme for activation and one enzyme for inactivation.

p.18
Catalytic Efficiency

What is the diffusion-controlled limit for catalytic efficiency?

It is the maximum rate of enzyme activity, represented by kcat / Km.

p.12
Enzyme Kinetics

What happens to equation 2 when substituting [E] with [E] total - [ES]?

It becomes k1([E] total - [ES])[S] = k-1[ES] + k2[ES].

p.36
Enzyme Inhibition

What was the accusation against the Syrian government in 2013?

Using sarin gas.

p.33
Enzyme Inhibition

How does an uncompetitive inhibitor affect the ES complex?

It changes the conformation, preventing it from proceeding to E + P.

p.17
Catalytic Efficiency

What does the catalytic rate constant (k cat) represent?

The number of substrate molecules converted to products per enzyme per unit time.

p.22
Factors Affecting Enzyme Activity

What role does exercise play in weight management?

Helps burn calories and maintain a healthy weight.

p.14
Michaelis-Menten Equation

When does the Michaelis-Menten equation simplify to K m?

When v 0 is one half of V max.

p.15
Michaelis-Menten Equation

What does K_m represent in enzyme kinetics?

The Michaelis constant, a measure of the affinity of an enzyme for its substrate to form the ES complex.

p.36
Enzyme Inhibition

What do irreversible inhibitors form with enzymes?

Stable covalent bonds.

p.43
Covalent Modification of Enzymes

How does covalent modification compare to allosteric regulation in terms of speed?

Covalent modification is usually slower than allosteric regulation.

p.42
Allosteric Regulation

What effect does binding of phosphoenolpyruvate to the regulatory site have on PFK-1?

Causes PFK-1 to switch to the inactive state and lowers its affinity for F6P.

p.28
Enzyme Inhibition

What are inhibitors in the context of enzymes?

Compounds that bind to an enzyme and interfere with its activity.

p.12
Enzyme Kinetics

How can the total enzyme concentration [E] be expressed in terms of [ES]?

[E] = [E] total - [ES].

p.18
Enzyme Kinetics

What controls the overall enzymatic rate?

Diffusion.

p.21
Michaelis-Menten Equation

What is the advantage of using the Lineweaver-Burke Plot?

It is easier to extrapolate values with a straight line compared to a hyperbolic curve.

p.14
Michaelis-Menten Equation

What is the Michaelis constant (K m)?

The substrate concentration at which the reaction velocity (V) is half of V max.

p.19
Catalytic Efficiency

What is catalytic efficiency represented by?

k cat / K m.

p.44
Covalent Modification of Enzymes

What effect do bulky negatively charged groups have on enzymes?

They affect the conformation of the enzyme.

p.32
Enzyme Kinetics

How do uncompetitive inhibitors affect enzyme kinetics?

They decrease both the maximum reaction rate (Vmax) and the Michaelis constant (Km).

p.11
Michaelis-Menten Equation

Why is determining [ES] challenging in enzyme kinetics?

[ES] is very difficult to determine.

p.35
Enzyme Inhibition

What aspect of the enzyme do non-competitive inhibitors alter?

They alter the conformation of the enzyme to affect catalysis.

p.1
Enzyme Structure and Function

What happens to enzymes during the reaction process?

Enzymes remain unchanged in the overall process.

p.9
Enzyme Kinetics

What is the role of E in the enzyme-catalyzed reaction?

E represents the enzyme.

p.43
Covalent Modification of Enzymes

Which protein kinases are involved in phosphorylation?

Ser/Thr protein kinase and Tyrosine protein kinase.

p.36
Enzyme Inhibition

What is the effect of DFP on mammals?

Causes paralysis.

p.19
Catalytic Efficiency

What does the diffusion-controlled limit indicate?

Products are formed as soon as the ES complex is formed.

p.13
Enzyme Kinetics

What is the initial velocity (v0) in enzyme kinetics?

It is defined as v0 = k2[ES].

p.27
Enzyme Kinetics

What is a sequential mechanism in multisubstrate reactions?

Both substrates bind to the enzyme before any product is released.

p.42
Enzyme Structure and Function

What is the reaction catalyzed by PFK-1?

Fructose-6-P + ATP -----> Fructose-1,6-bisphosphate + ADP.

p.32
Enzyme Inhibition

What is the effect of uncompetitive inhibition on the enzyme-substrate complex?

It stabilizes the enzyme-substrate complex, making it less likely to convert to product.

p.15
Michaelis-Menten Equation

What happens to K_m if k_1 (the rate at which the ES complex forms) is larger?

K_m decreases, indicating higher affinity for the substrate.

p.9
Enzyme Kinetics

What do the symbols k1, k-1, k2, and k-2 represent in enzyme kinetics?

They represent the rate constants for binding and catalysis.

p.28
Enzyme Inhibition

How can inhibitors affect enzyme activity?

They can prevent the formation of the ES complex or prevent the breakdown of ES to E + P.

p.1
Enzyme Structure and Function

What do enzymes selectively recognize?

Enzymes selectively recognize proper substrates over other molecules.

p.44
Covalent Modification of Enzymes

Can phosphorylation activate enzymes?

Yes, other enzymes may be activated by phosphorylation.

p.40
Allosteric Regulation

How do negative modulators influence allosteric enzymes?

They decrease the enzyme's activity.

p.1
Enzyme Kinetics

Do enzymes affect the equilibrium of reactions?

No, enzymes do not affect the equilibrium of reactions.

p.13
Michaelis-Menten Equation

How is the Michaelis-Menten equation derived?

By substituting Vmax into the equation for initial velocity.

p.36
Enzyme Inhibition

What type of compound is DFP?

An organophosphate compound.

p.28
Enzyme Inhibition

What is an irreversible inhibitor?

An inhibitor that binds to an enzyme through covalent bonds and binds irreversibly.

p.18
Enzyme Kinetics

What does an increase in kcat indicate about enzyme performance?

It indicates a faster conversion of substrate to product.

p.32
Enzyme Inhibition

In which type of inhibition does the inhibitor bind to the enzyme-substrate complex?

Uncompetitive inhibition.

p.15
Michaelis-Menten Equation

What are the components of the rate constants in the K_m equation?

k_1 (formation of ES complex), k_-1 (dissociation of ES complex), and k_2 (conversion of ES to product).

p.15
Michaelis-Menten Equation

What does a high affinity for a substrate imply about k_1?

k_1 becomes larger, leading to a high rate of binding.

p.18
Catalytic Efficiency

What is catalytic perfection?

It occurs when catalysis is rapid, with product formation and release occurring immediately after the ES complex is formed.

p.28
Enzyme Inhibition

Why are enzyme inhibitors important?

They play crucial roles in regulating enzyme activity and can be used in drug development.

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Study Smarter, Not Harder